rs932431 chr1:44252627 C>T
- Sequence
cagtcccatcacaaacacggcgcc[C/T]ggcggcttatgggggcttagcagc
- ASB in cell types
- neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -4.53 | 4.22 | 1.00 | 1.35 | Weak Concordant | |||
| RAD21_HUMAN | -2.08 | 2.46 | 1.00 | n/a | n/a | |||
| SMC3_HUMAN | -2.02 | 2.46 | 1.00 | n/a | n/a | |||
| EP300_HUMAN | -1.62 | 2.01 | 1.00 | n/a | n/a |
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Motif analysis
