ADASTRA v6.1.0
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rs934854
chr9:6631611
A
>
G
Sequence
ttcaggccaaatgctgagtttgaa[A/G]tgagaatcagtgcaggtcccagag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MEF2B_HUMAN
IKZF2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN
n/a
3.14
1.00
2.1·10
-4
1.00
n/a
No Hit
IKZF2_HUMAN
-2.22
1.99
1.00
6.3·10
-3
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
major depressive disorder
GTEx eQTL
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Spleen
,
Stomach
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)