rs935238 chr12:46150076 A>C
- Sequence
cttacttagaagtctgtcccataa[A/C]aataaacacacacaaaattcagga
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma) primary prostate cancer
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.39 | 0.21 | 1.32 | -1.00 | Weak Concordant | |||
| FOXA1_HUMAN | 2.03 | -0.26 | 1.44 | -1.45 | Weak Concordant |
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Motif analysis
