rs935598 chr2:111537605 C>T

Sequence
ccgtaagcacagttcagggccttt[C/T]gtggatgtggcgtgggtgcagagg
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN ETS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -0.99 1.67 1.000.02 1.00 n/a n/a
ETS1_HUMAN -1.81 2.20 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin hdl cholesterol microalbuminuria
GTEx eQTL Cells_Cultured_fibroblasts

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