rs937726 chr2:98275056 T>C
- Sequence
cgtctgccacgtgtttgtttattt[T/C]gcagcacacttcactacctgacat
- ASB in cell types
- LNCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.96 | -0.19 | 1.84 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, arthritis including non-rheumatoid, hdl cholesterol, longstanding arthritis, rheumatoid arthritis, sporadic creutzfeldt-jakob disease, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Skin_Not_Sun_Exposed_Suprapubic, Stomach, Testis, Thyroid