rs9384388 chr6:150323340 G>A
- Sequence
gctttctctatttcaggtcattgc[G/A]caatgcagatagacccaggggctg
- ASB in cell types
- K562 (myelogenous leukemia) MSC (mesenchymal stem cells) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- CEBPB_HUMAN ATF3_HUMAN REQU_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 2.82 | -2.27 | 2.38 | -0.69 | Weak Concordant | |||
| ATF3_HUMAN | 2.09 | -1.95 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | 2.53 | -2.08 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.08 | -2.00 | 1.25 | n/a | n/a | |||
| IRF9_HUMAN | 2.95 | -2.61 | 1.00 | n/a | No Hit |
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Motif analysis
