rs939276 chr17:77258929 A>G
- Sequence
tcgctcactcttctctctcctgcc[A/G]ccttgtgaaggaggtatttgcttc
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.70 | -0.71 | 1.67 | -1.85 | Weak Concordant |
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Motif analysis
