rs940120 chr9:14906870 G>A
- Sequence
gacttgaggctcagtcgctccctg[G/A]gcatttatctgtcctttgttgctg
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.89 | 1.65 | 1.40 | 0.13 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP adiponectin levels, arthritis including non-rheumatoid, body mass index (bmi), bone area, bone mineral content, fasting blood glucose, homa-ir, infant head circumference, longstanding arthritis, neuroblastoma (brain cancer), partial epilepsy
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary