rs942190 chr14:89956320 T>C

Sequence
gtgagtaggaaagcgcccaccacg[T/C]gccaggcgcttaagctttctgtgc
ASB in cell types
primary B-CLL cells
ASB for transcription factors
BRD4_HUMAN MXI1_HUMAN MNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.39 0.42 3.8·10-30.86 1.11 n/a n/a
MXI1_HUMAN 1.79 -1.61 0.031.00 1.00 -2.40 Concordant
MNT_HUMAN 2.31 -1.82 0.041.00 1.50 -3.32 Concordant
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Motif analysis

MNT_HUMAN Concordant
MNT_HUMAN pic

Genetic associations

GRASP fasting insulin,  hdl cholesterol change with statins,  homa-ir,  triglycerides,  waist hip ratio
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Pituitary,  Thyroid,  Whole_Blood

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