rs942513 chr6:149990195 G>A
- Sequence
cgacaggggcagaaggagccctgc[G/A]tggggaattgagaagggtgcggcg
- ASB in cell types
- A673 (Ewing sarcoma) MRC-iPS-25 (induced pluripotent stem cells)
- ASB for transcription factors
- JARD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JARD2_HUMAN | -1.24 | 2.05 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), ldl cholesterol, systolic blood pressure (sbp), total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Hippocampus, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Prostate, Thyroid, Uterus