rs9426296 chr1:28648889 G>T
- Sequence
tgacctaattagcaaggtaattca[G/T]acctgtatcctagcacttaagaag
- ASB in cell types
- HEK293 (embryonic kidney) MV-4-11 (Childhood acute monocytic leukemia) GM12878 (female B-cells lymphoblastoid cell line) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- ZSC18_HUMAN E4F1_HUMAN ZN600_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSC18_HUMAN | n/a | 3.34 | 2.00 | n/a | n/a | |||
| E4F1_HUMAN | 2.71 | -2.78 | 1.00 | n/a | No Hit | |||
| ZN600_HUMAN | n/a | 1.56 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, comorbid depressive syndrome and alcohol dependence, premature ovarian failure, systolic blood pressure (sbp), tetrology of fallot
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Pituitary, Spleen, Testis, Thyroid, Whole_Blood