rs944172 chr9:107755513 C>T
- Sequence
aggggacttgaaaattcactctgc[C/T]gcatgctccatgactcatacattt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- CLOCK_HUMAN CDK8_HUMAN TF65_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | n/a | 3.60 | 2.00 | -3.96 | Discordant | |||
| CDK8_HUMAN | 1.37 | -0.58 | 1.00 | n/a | n/a | |||
| TF65_HUMAN | -0.82 | 1.41 | 2.88 | n/a | No Hit |
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Motif analysis
