rs944174 chr9:107752163 G>C

Sequence
ctgctcacaaggtgagcaaggggg[G/C]ctggaagacaagctctctctggac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN n/a 3.79 1.001.2·10-6 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  hdl cholesterol,  ldl cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Testis

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