rs944629 chrX:108217266 C>G

Sequence
ctaatattaagaggggaagcagat[C/G]tgtgcagtgatccagtttagtaag
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN n/a 2.79 1.001.3·10-4 1.50 4.65 Concordant
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Motif analysis

TCF21_HUMAN Concordant
TCF21_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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