rs946172 chr1:183291716 C>G

Sequence
cccagcatccccagaagatcagga[C/G]ttacaatgttaagaggcctcattt
ASB for transcription factors
RARA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -2.02 2.17 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Brain_Anterior_cingulate_cortex_BA24,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Nerve_Tibial

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