rs946227 chr6:137761625 G>A
- Sequence
gaattgtggtgagtacattctagc[G/A]ggatgattaggtagaaagaactga
- ASB for transcription factors
- KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KAISO_HUMAN | 3.19 | -2.99 | 1.00 | -4.01 | Concordant |
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Motif analysis
Genetic associations
GRASP crohns disease, combined control dataset, diabetic nephropathy in type 2 diabetes mellitus - end stage renal disease, hdl cholesterol, irritible bowel syndrome, total cholesterol