rs947092 chr10:30765375 G>C

Sequence
atgacagctcaaaatgggatcaaa[G/C]agttgaagctgaaaacgaatgctg
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN 2.41 n/a 3.3·10-31.00 1.50 n/a n/a
SMCA4_HUMAN 1.81 -1.48 0.041.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  cystatin c in serum,  paternal transmission distortion,  total cholesterol,  total cholesterol change with statins,  transmission distortion,  years of education
GTEx eQTL Nerve_Tibial

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