rs947403 chr10:970661 G>A

Sequence
tttgcaaacagggaaaattcagcc[G/A]tgtcagctttgattgctctcaagg
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
FOXA2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 1.81 0.49 4.2·10-41.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia,  major depressive disorder,  neuroticism,  total cholesterol change with statins
GTEx eQTL Adrenal_Gland,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal

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