rs947436 chr20:2124750 C>T

Sequence
agctcagtcttcaactgtgaagac[C/T]ctagtggcgctagatacctgtata
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MEF2B_HUMAN COE1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN -3.34 1.94 1.000.03 1.50 n/a No Hit
COE1_HUMAN -1.96 2.28 1.000.04 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  hdl cholesterol,  total cholesterol,  triglycerides

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