rs947660 chr1:156490516 T>A
- Sequence
ctgagctaattttaactcaccgac[T/A]ggggacctgggggcgggctgttgg
- ASB in cell types
- thyroid gland MS-1 (Small cell lung carcinoma) transverse colon GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.33 | 2.90 | 1.00 | -1.26 | Weak Discordant |
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Motif analysis
