rs949073 chr6:147805280 G>A

Sequence
gatgtgaatagcagcagcttggaa[G/A]tgcccaagtgcagcataagtcttc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.74 -0.17 0.011.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  depression scale of the revised neo personality inventory,  obesity with early age of onset (age >2),  systolic blood pressure (sbp),  triglycerides,  waist hip ratio
GTEx eQTL Colon_Transverse,  Testis

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