rs949478 chr1:203244957 G>C
- Sequence
accttaggtactcagtctccagcc[G/C]ctacagaggtcaaattgatacagc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN CEBPA_HUMAN SKI_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.78 | -0.68 | 1.25 | n/a | No Hit | |||
| CEBPA_HUMAN | 1.53 | -0.14 | 1.25 | n/a | No Hit | |||
| SKI_HUMAN | 2.28 | -1.98 | 1.00 | n/a | n/a |
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