rs951420 chr1:183310777 C>T

Sequence
atcctgttctacacataaacaagg[C/T]ctctgttttaaagggaaactagaa
ASB in cell types
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
ASB for transcription factors
GRHL2_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN 1.60 -0.13 7.4·10-31.00 1.69 n/a No Hit
FOXA1_HUMAN 1.41 -0.41 0.021.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  infant head circumference
GTEx eQTL Nerve_Tibial

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