rs951773 chr12:52380451 A>G
- Sequence
cattcatcagctcctggtactcgc[A/G]cagctgccgcgccatgtcctgctt
- ASB in cell types
- T47D (invasive ductal carcinoma) Ishikawa (endometrial adenocarcinoma) MCF10CA1a (breast metastatic epithelial cells) Peyer's patch
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.71 | -0.76 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 1.37 | 0.67 | 1.22 | n/a | No Hit |
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