rs9521 chr10:103598701 C>G

Sequence
ccccctccctcctctgcctgctgc[C/G]ggcagtatccttcagcatcacaaa
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.87 0.50 0.030.77 1.12 0.08 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  chronic kidney disease,  parkinsons disease,  serum creatinine,  triglycerides
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Testis,  Thyroid

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