rs952481 chr3:195101369 T>C

Sequence
aacagaatctctctggctggttag[T/C]atctttactctcagggcatcatga
ASB in cell types
CD14+ monocytes
ASB for transcription factors
SPI1_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.20 0.45 2.4·10-31.00 1.95 n/a No Hit
STAT1_HUMAN 1.93 -1.58 9.8·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  hdl cholesterol,  lung cancer,  lung cancer (adenocarcinoma),  lung cancer (non-small cell lung cancer),  lung cancer (squamous cell carcinoma),  rheumatoid arthritis,  schizophrenia,  sporadic creutzfeldt-jakob disease,  total cholesterol
GTEx eQTL Colon_Sigmoid

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