rs952579 chr6:21884209 G>A
- Sequence
atactaaatagttggaggggagcc[G/A]agtgattgcgtgacttatttttag
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.05 | 0.01 | 1.40 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, breast cancer (brca2-positive), age of onset, late onset alzheimers disease, parkinsons disease, schizophrenia, systolic blood pressure (sbp), transmission distortion