rs952851 chr12:86083563 C>T
- Sequence
gaaatcctcaccagcttgtgagta[C/T]aaataaaatcacagagacacgatt
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.55 | -0.55 | 1.56 | -2.37 | Concordant | |||
| FOXA1_HUMAN | 1.23 | -2.12 | 1.50 | 1.66 | Weak Discordant |
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Motif analysis
