rs953233 chr6:90286098 C>T

Sequence
tggaacagctgcactgaaatctca[C/T]gagccagttaattttaactggttt
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) germinal center B-cells
ASB for transcription factors
BHE40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN 1.90 -1.60 0.031.00 1.00 -2.84 Concordant
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Motif analysis

BHE40_HUMAN Concordant
BHE40_HUMAN pic

Genetic associations

GRASP graves disease,  homa-ir,  refractive error,  total cholesterol

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