rs953678 chr5:172320162 G>A
- Sequence
gtttgggaaacagtgtcctcatct[G/A]ctgggtcccatagttttggccttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- REQU_HUMAN IKZF2_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.91 | -0.13 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 1.71 | -1.44 | 1.00 | n/a | No Hit |
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