rs953679 chr5:172320240 A>G

Sequence
gccagattttcctttttgctctgt[A/G]ccccttggacatttcgtgccaatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
REQU_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN 2.90 -2.88 3.2·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Breast_Mammary_Tissue,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis

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