rs9543 chr19:14571992 G>C
- Sequence
gcccaggtagcgccggaccaggtg[G/C]gcccccatggctgcagtcgctgca
- ASB in cell types
- HEK293 (embryonic kidney) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231 (breast adenocarcinoma) neural cell
- ASB for transcription factors
- JUN_HUMAN BRD2_HUMAN CDN1B_HUMAN ZBT21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -2.15 | 2.59 | 2.29 | n/a | No Hit | |||
| BRD2_HUMAN | 1.08 | 1.86 | 2.00 | n/a | n/a | |||
| CDN1B_HUMAN | -2.67 | 2.31 | 2.33 | n/a | n/a | |||
| ZBT21_HUMAN | -2.32 | 3.11 | 2.00 | n/a | n/a |
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