rs954466 chr6:150628191 G>A

Sequence
gtcagagggaaggctgttgctgca[G/A]taaaactggcaatgaagcaatgat
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CEBPA_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN n/a 3.77 1.001.1·10-4 2.00 n/a No Hit
TCF21_HUMAN 2.14 -1.22 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  birth weight,  ldl cholesterol,  total cholesterol,  triglycerides
GTEx eQTL Cells_Cultured_fibroblasts

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