rs954493 chr3:36707686 G>A

Sequence
aagagggccacgggcagttgtaca[G/A]agtattctttggccctagagtgac
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.45 0.94 0.940.02 1.58 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  glaucoma (normal pressure glaucoma),  optic nerve degeneration in normal-pressure glaucoma (cup-to-disc ratio),  sporadic creutzfeldt-jakob disease,  waist hip ratio
GTEx eQTL Nerve_Tibial

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