rs956330 chr13:35803938 T>C

Sequence
gtcttctattctggcagtaggaac[T/C]attagacttagtgatggagcttcc
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -0.11 1.43 1.001.2·10-4 1.42 n/a n/a
SMCA4_HUMAN -0.40 1.12 1.000.02 1.42 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension),  partial epilepsy,  total cholesterol

Download