rs957446 chr8:94529143 T>A

Sequence
ctcctcaggaatactgtctactgt[T/A]cgtcgatcatcctcatcctcatcc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PKNX1_HUMAN REQU_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -1.73 2.12 1.000.02 1.00 n/a No Hit
REQU_HUMAN 2.49 -2.03 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2),  refractive error
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Frontal_Cortex_BA9,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Testis,  Thyroid

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