rs960121 chr17:67717680 G>A
- Sequence
agccgattcaggacccagtaagca[G/A]cacttccgcgcctaccctatccct
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- TYY1_HUMAN STAT1_HUMAN E4F1_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | n/a | 3.78 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 0.16 | 2.69 | 2.00 | n/a | No Hit | |||
| E4F1_HUMAN | -3.58 | 2.90 | 1.75 | -0.60 | Weak Discordant | |||
| FOXK2_HUMAN | 0.10 | 2.75 | 1.75 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.53 | 2.34 | 1.50 | n/a | No Hit |
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Motif analysis
