rs960758 chr16:88452849 G>A

Sequence
ggggcgcaggatgcggtgccgcgg[G/A]gcagcagaacagaaccgaataggt
ASB in cell types
thymus-derived CD34- cells UCLA1 hESCs GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RBM25_HUMAN BC11B_HUMAN AP2C_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 2.86 -1.15 6.6·10-71.00 2.00 n/a n/a
BC11B_HUMAN 3.15 n/a 1.2·10-31.00 2.00 n/a n/a
AP2C_HUMAN 2.56 n/a 9.8·10-31.00 1.00 -4.50 Concordant
Items per page:
1 – 3 of 3

Motif analysis

AP2C_HUMAN Concordant
AP2C_HUMAN pic

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

Download