rs960819 chr21:38492090 A>C
- Sequence
tcatgtttctctgcacagtaattc[A/C]ctatgtacagctagggtgaatagc
- ASB in cell types
- K562 (myelogenous leukemia) TF-1 (erythroleukemia)
- ASB for transcription factors
- GATA2_HUMAN SMC3_HUMAN MTG16_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | n/a | 2.34 | 3.00 | n/a | No Hit | |||
| SMC3_HUMAN | n/a | 3.36 | 3.00 | n/a | n/a | |||
| MTG16_HUMAN | -2.24 | 2.50 | 1.00 | n/a | n/a | |||
| KDM1A_HUMAN | -0.36 | 1.85 | 1.00 | n/a | n/a | |||
| RING2_HUMAN | -2.11 | 2.53 | 1.00 | n/a | n/a |
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