rs961671 chr3:63329972 G>C
- Sequence
atcaggttgtgtacaggagagcat[G/C]taaccccttgttcccagggtctgg
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.62 | -0.60 | 1.50 | -3.05 | Concordant | |||
| FOXA1_HUMAN | 1.65 | -0.09 | 1.50 | n/a | No Hit |
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Motif analysis
