rs962142 chr5:114822797 C>A
- Sequence
aaaaagcaaatttaccacagacct[C/A]taaaaataaggtaagcaaaggcat
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.15 | 2.21 | 1.42 | 2.00 | Concordant |
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Motif analysis
