rs962294 chr7:128347725 G>C

Sequence
ccttaatttaggacaaatctaact[G/C]tgtctctatgcccatcagggggca
ASB in cell types
CD34+ hematopoietic stem cells WA09 (embryonic stem cells) gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.91 0.36 2.2·10-171.00 1.49 n/a No Hit
RAD21_HUMAN 1.02 0.10 1.0·10-41.00 1.35 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder),  homa-ir,  irritible bowel syndrome
GTEx eQTL Heart_Atrial_Appendage

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