rs962771 chr10:88833935 C>T
- Sequence
gtaattgtggctctgttactacct[C/T]ccccggtgactgtggacaattcac
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) monocyte-derived dendritic cells macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN SMCA4_HUMAN TBX21_HUMAN ETS1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.79 | -0.18 | 2.00 | 1.81 | Weak Discordant | |||
| SMCA4_HUMAN | 1.57 | -0.06 | 1.47 | n/a | n/a | |||
| TBX21_HUMAN | 2.27 | -2.27 | 1.00 | n/a | No Hit | |||
| ETS1_HUMAN | 1.59 | -2.84 | 1.50 | n/a | No Hit |
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Motif analysis
