rs962833 chr18:62202096 G>C

Sequence
ttaccaactatgatgaaagtacct[G/C]attatttgtttctgagttataaag
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.54 n/a 2.4·10-41.00 2.00 -0.70 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Coronary,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Thyroid

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