rs963022 chr13:96849892 A>T
- Sequence
actggaagaagaggctttgcatta[A/T]taccttttgggtttgtgaacaagt
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | -0.33 | 1.63 | 3.17 | |||
| 22RV1 (prostate carcinoma) | 1.92 | -1.26 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, cystatin c in serum, major depressive disorder (broad definition), recurrent early onset major depressive disorder (broad definition)