rs964459 chr17:33561186 C>T

Sequence
aagaattctttccacttccccact[C/T]atgaaggccaacactagaatttat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.27 -1.92 9.9·10-41.00 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP infant head circumference,  parkinsons disease,  stabilized warfarin dose
GTEx eQTL Artery_Coronary,  Artery_Tibial,  Testis

Download