rs964633 chr3:132180609 G>C
- Sequence
ccaagactgtacaagcatggtttt[G/C]ggccagtctatatcaggagaccac
- ASB in cell types
- VCaP (prostate carcinoma) MCF10AT1 (breast premetastatic epithelial cells)
- ASB for transcription factors
- FOXA1_HUMAN CTCF_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.18 | 1.18 | 1.56 | n/a | No Hit | |||
| CTCF_HUMAN | 0.53 | 0.90 | 1.27 | n/a | No Hit | |||
| ERG_HUMAN | -0.22 | 1.12 | 2.00 | n/a | No Hit |
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