rs9655490 chr7:5977892 A>G

Sequence
cctgcactttgggaggctgaggcc[A/G]gcggatcatgaggtcaggagatac
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 2.28 n/a 4.4·10-31.00 1.50
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Motif analysis

No data available

Genetic associations

GRASP major depressive disorder (broad definition),  major depressive disorder (broad definition) (males)
GTEx eQTL Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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