rs9659656 chr1:9389040 A>G
- Sequence
ctgagtcatctgtccctggggaag[A/G]tttatggtgctgaagtctttggga
- ASB in cell types
- K562 (myelogenous leukemia) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- ATF3_HUMAN SSXT_HUMAN EMSY_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 3.53 | n/a | 1.17 | n/a | No Hit | |||
| SSXT_HUMAN | 3.02 | -2.68 | 1.25 | n/a | n/a | |||
| EMSY_HUMAN | 2.89 | -2.77 | 1.00 | n/a | n/a | |||
| SMRC1_HUMAN | 2.07 | 0.12 | 1.75 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), birth weight, homa-b, serum creatinine