rs9661428 chr1:41345260 C>T

Sequence
cctcagcctcctgaggagctggga[C/T]tacaggcgcctggcaccatgcccg
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN n/a 3.42 1.001.1·10-4 1.33 5.45 Concordant
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Motif analysis

OTX2_HUMAN Concordant
OTX2_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Liver

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